Cytoscape cPath PlugIn
Cytoscape is an open source bioinformatics software platform for visualizing molecular interaction networks and integrating these interactions with gene expression profiles and other state data.
The cPath PlugIn (which is automatically bundled with Cytoscape 2.4) enables Cytoscape users to directly query, retrieve and visualize interactions retrieved from the cPath database.
How to use the Cytoscape cPath PlugIn
- Download and install the latest version of Cytoscape from the main Cytoscape web site.
- From the main Cytoscape menu, select: File → New → Network → Construct network using cPath.
- Enter your search criteria, e.g. "p53". Then, click the "Search" button.
Bugs / Feature Requests
If you encounter a bug with this PlugIn, or have a feature suggestion, we encourage you to use the Cytoscape Bug Tracker.
If you log a bug, we will automatically email you when the bug is resolved.
Contacts
Ethan Cerami
Benjamin Gross
Computational Biology Center
Memorial Sloan-Kettering Cancer Center, New York City
License / Credits
This software is made available under the LGPL (Lesser General Public License).This product includes software developed by the Apache Software Foundation